Author: Shen Hua
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AnnotSV Singularity Container
AnnotSV is a robust open-source software package and web-based platform designed for the annotation and prioritization of structural variants (SVs) in the human genome. Because the native installation process can be somewhat involved, I provide a Singularity container that bundles AnnotSV for straightforward, ready-to-use deployment.
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IGV User Guide | Generating Genomic Visualizations on Linux
IGV (Integrative Genomics Viewer) is a powerful and versatile tool for visualizing genomic data, enabling researchers to explore genomic variations effectively. Its graphical interface makes it very user-friendly on Windows systems. However, when batch processing large-scale bioinformatics data, Linux often provides a more suitable environment. Unfortunately, using IGV on Linux can be less straightforward. This article documents the detailed procedures for running and utilizing IGV on Linux systems.